diff options
| author | Ghislain Vaillant <ghislain.vaillant@inria.fr> | 2026-02-20 12:31:39 +0100 |
|---|---|---|
| committer | Ghislain Vaillant <ghislain.vaillant@inria.fr> | 2026-02-21 14:45:52 +0100 |
| commit | 03b2cbd94696ad190efd0ea9d2c9cf4d99b3eda6 (patch) | |
| tree | 1a732bb5676a5cedbc4296777db0576b58cc5f0e | |
| parent | e02db7ef141becda42c9e091ff38355d79fe714a (diff) | |
bioinformatics: cat: Switch to git.
* guix-science/packages/bioinformatics.scm (cat)
[source]: Switch to git, update remote.
[home-page]: Change to new organisation.
| -rw-r--r-- | guix-science/packages/bioinformatics.scm | 19 |
1 files changed, 10 insertions, 9 deletions
diff --git a/guix-science/packages/bioinformatics.scm b/guix-science/packages/bioinformatics.scm index fe6dd01..1d6172e 100644 --- a/guix-science/packages/bioinformatics.scm +++ b/guix-science/packages/bioinformatics.scm | |||
| @@ -2757,14 +2757,15 @@ This package provides IQ-TREE version 3.") | |||
| 2757 | (package | 2757 | (package |
| 2758 | (name "cat") | 2758 | (name "cat") |
| 2759 | (version "5.2.3") | 2759 | (version "5.2.3") |
| 2760 | (source (origin | 2760 | (source |
| 2761 | (method url-fetch) | 2761 | (origin |
| 2762 | (uri (string-append | 2762 | (method git-fetch) |
| 2763 | "https://github.com/dutilh/CAT/archive/v" | 2763 | (uri (git-reference |
| 2764 | version".tar.gz")) | 2764 | (url "https://github.com/MGXlab/CAT_pack") |
| 2765 | (sha256 | 2765 | (commit (string-append "v" version)))) |
| 2766 | (base32 | 2766 | (file-name (git-file-name name version)) |
| 2767 | "16wjl8ng6dfz60phvdrj1bq1mp8nm42x61mh0idgrlzbq0lfpa0r")))) | 2767 | (sha256 |
| 2768 | (base32 "0gmjzk1ya36crj949sxf5djlkcxanvp0g7i7a8xsw85rlq2k857m")))) | ||
| 2768 | (build-system gnu-build-system) | 2769 | (build-system gnu-build-system) |
| 2769 | (arguments | 2770 | (arguments |
| 2770 | (list | 2771 | (list |
| @@ -2793,7 +2794,7 @@ This package provides IQ-TREE version 3.") | |||
| 2793 | `("GUIX_PYTHONPATH" ":" = (,share "$GUIX_PYTHONPATH")))))))))) | 2794 | `("GUIX_PYTHONPATH" ":" = (,share "$GUIX_PYTHONPATH")))))))))) |
| 2794 | (inputs | 2795 | (inputs |
| 2795 | (list diamond prodigal python)) | 2796 | (list diamond prodigal python)) |
| 2796 | (home-page "https://github.com/dutilh/CAT") | 2797 | (home-page "https://github.com/MGXlab/CAT_pack") |
| 2797 | (synopsis "Tool for taxonomic classification of contigs and metagenome-assembled genomes") | 2798 | (synopsis "Tool for taxonomic classification of contigs and metagenome-assembled genomes") |
| 2798 | (description "Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) | 2799 | (description "Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) |
| 2799 | are pipelines for the taxonomic classification of long DNA sequences and | 2800 | are pipelines for the taxonomic classification of long DNA sequences and |
