guix/gnu/packages/cran.scm, branch master

gnu: r-sf: Refresh input.

2026-08-13T10:01:33+00:00

* gnu/packages/cran.scm (r-sf)[inputs]: Remove proj-9.3; add proj.

gnu: Remove r-seurat5.

2026-08-10T08:54:30+00:00

* gnu/packages/cran.scm (r-seurat5): Delete variable.

gnu: Remove r-seurat5object.

2026-08-10T08:54:30+00:00

* gnu/packages/cran.scm (r-seurat5object): Delete variable.

gnu: Remove r-grr.

2026-08-05T09:03:17+00:00

* gnu/packages/cran.scm (r-grr): Delete variable.

gnu: Remove r-matrix-utils.

2026-08-05T08:59:31+00:00

* gnu/packages/cran.scm (r-matrix-utils): Delete variable.

gnu: onigmo: Move to (gnu packages regex).

2026-07-23T09:00:04+00:00

* gnu/packages/textutils.scm (onigmo): Deprecate and move from here ...
* gnu/packages/regex.scm: ... to ehre.

* gnu/packages/cran.scm: Use (gnu packages regex).

gnu: r-ore: Unbundle onigmo.

2026-07-20T09:56:21+00:00

* gnu/packages/cran.scm (r-ore)[source]: Remove Onigmo sources
and reference the onigmo library.
[inputs] Add onigmo.

Signed-off-by: Andreas Enge

gnu: r-keyring: And and correct inputs.

2026-07-08T16:59:36+00:00

Add libsecret and which so r-keyring can use the Secret Service API.
Delete r-callr and r-mockery, which are not used.

* gnu/packages/cran.scm (r-keyring)[inputs]: Add libsecret.
[native-inputs]: Remove r-callr and r-mockery; add which.

Signed-off-by: Andreas Enge

gnu: r-sf: Don't depend on openssh.

2026-07-08T16:59:36+00:00

* gnu/packages/cran.scm (r-sf)[inputs]: Remove openssh.

Change-Id: I8cf7a78f581d15fe2199af9284e6163efbc1571b
Signed-off-by: Andreas Enge

gnu: r-parallelly: Don't depend on openssh.

2026-07-08T16:59:36+00:00

* gnu/packages/cran.scm (r-parallelly)[inputs]: Remove openssh.
[arguments]: Add a 'pre-check phase to add dummy ssh to PATH.

Change-Id: I84a84d1a3ff6797723f3ef20f11a6af3eb646f85
Signed-off-by: Andreas Enge