guix/gnu, branch master Transactional package manager, declarative GNU/Linux distribution, reproducible deployment tool, and more! https://guix.gnu.org gnu: trealla: Update to 3.9.24. 2026-09-02T10:28:24+00:00 jgart jgart@dismail.de 2026-09-02T10:09:03+00:00 a787c238edc4544931a42b21f517db40a719a298 * gnu/packages/prolog.scm (trealla): Update to 3.9.24. Change-Id: I151fe9151dedc918a8f66c2486ff7ee078894623 
* gnu/packages/prolog.scm (trealla): Update to 3.9.24.

Change-Id: I151fe9151dedc918a8f66c2486ff7ee078894623
gnu: mumps: Update to 5.9.1. 2026-09-02T10:16:02+00:00 MARAIT Gilles gilles.marait@inria.fr 2026-08-27T12:35:33+00:00 925c116b46941fcd41e9fa35f3fdc8a526b674a0 * gnu/packages/maths.scm (mumps): Update to 5.9.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Merges: #10857 
* gnu/packages/maths.scm (mumps): Update to 5.9.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merges: #10857
linux-initrd: Adjust 'base-initrd-modules' to fallback to 'linux-libre'. 2026-09-02T10:16:02+00:00 Sergio Pastor Pérez sergio.pastor-perez@inria.fr 2026-08-28T10:23:59+00:00 be08b720825a09937e15a64c4c3ff81f56ddbe1f * gnu/system/linux-initrd.scm (base-initrd-modules): Adjust to fallback to 'linux-libre' modules if the provided kernel package misses the 'base-initrd-modules' package property. Fixes: #10859 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Merges: #10885 
* gnu/system/linux-initrd.scm (base-initrd-modules): Adjust to fallback to
'linux-libre' modules if the provided kernel package misses the
'base-initrd-modules' package property.

Fixes: #10859
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merges: #10885
gnu: libexpected: Update to 1.3.1. 2026-09-02T07:12:25+00:00 Gábor Udvari mail@gaborudvari.com 2026-09-02T06:21:58+00:00 223158aae1b0e8e94c45cecba695d8fc59e5bc4a * gnu/packages/cpp.scm (libexpected): Update to 1.3.1. Merges: https://codeberg.org/guix/guix/pulls/10982 Signed-off-by: Nguyễn Gia Phong <cnx@loang.net> 
* gnu/packages/cpp.scm (libexpected): Update to 1.3.1.

Merges: https://codeberg.org/guix/guix/pulls/10982
Signed-off-by: Nguyễn Gia Phong <cnx@loang.net>
gnu: cambalache: Relocate to (gnu packages gnome-xyz). 2026-09-02T00:17:49+00:00 Maxim Cournoyer maxim@guixotic.coop 2026-08-31T01:20:19+00:00 5c217ab1361758851ac89bc523015fcd965c0a83 * gnu/packages/gnome.scm (cambalache): Add deprecated symbol here, and relocate to... * gnu/packages/gnome-xyz.scm (cambalache): ... here. 
* gnu/packages/gnome.scm (cambalache): Add deprecated symbol here, and
relocate to...
* gnu/packages/gnome-xyz.scm (cambalache): ... here.
gnu: libfyaml: Fix build on 32bit architectures. 2026-09-01T23:44:35+00:00 Maxim Cournoyer maxim@guixotic.coop 2026-09-01T23:44:35+00:00 abbd7868a0982361179e9a6f6860a877edcd7a54 * gnu/packages/patches/libfyaml-vlsize-32bit-fixes.patch: New file. * gnu/packages/serialization.scm (libfyaml) [source]: Apply patch. * gnu/local.mk (dist_patch_DATA): Register it. 
* gnu/packages/patches/libfyaml-vlsize-32bit-fixes.patch: New file.
* gnu/packages/serialization.scm (libfyaml) [source]: Apply patch.
* gnu/local.mk (dist_patch_DATA): Register it.
gnu: snakemake: Improve dependents bootstrap. 2026-09-01T23:23:38+00:00 Nicolas Graves ngraves@ngraves.fr 2026-08-18T11:06:12+00:00 631fd912f1a7bd85a30e7c5083579b1c949d2e8a * gnu/packages/python-science.scm (python-snakemake-interface-logger-plugins-bootstrap): Add package. (python-snakemake-logger-plugin-rich-bootstrap): Likewise. (python-snakemake-interface-logger-plugins)[native-inputs]: Replace python-snakemake-logger-plugin-rich by python-snakemake-logger-plugin-rich-bootstrap. (python-snakemake-logger-plugin-rich)[propagated-inputs]: Replace python-snakemake-interface-logger-plugins-bootstrap by python-snakemake-interface-logger-plugins. [native-inputs]: Remove unused python-pytest. Merges: guix/guix!10625 Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> 
* gnu/packages/python-science.scm
(python-snakemake-interface-logger-plugins-bootstrap): Add package.
(python-snakemake-logger-plugin-rich-bootstrap): Likewise.
(python-snakemake-interface-logger-plugins)[native-inputs]: Replace
python-snakemake-logger-plugin-rich by
python-snakemake-logger-plugin-rich-bootstrap.
(python-snakemake-logger-plugin-rich)[propagated-inputs]: Replace
python-snakemake-interface-logger-plugins-bootstrap by
python-snakemake-interface-logger-plugins.
[native-inputs]: Remove unused python-pytest.

Merges: guix/guix!10625
Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: snakemake: Update to 9.25.1. 2026-09-01T23:23:29+00:00 Nicolas Graves ngraves@ngraves.fr 2026-08-17T19:20:27+00:00 643e9233e1ad76031a46234a9091ef4e48de0f31 * gnu/packages/python-science.scm (snakemake): Update to 9.25.1. [source]: Switch to git-fetch. [arguments]{test-flags}: Refresh them. {phases}: Add phase 'relax-requirements, drop phase 'call-wrapper-not-wrapped-snakemake, which was not effective for some time already. [propagated-inputs]: Add python-snakemake-interface-logger-plugins, python-snakemake-interface-scheduler-plugins, python-snakemake-interface-software-deployment-plugins, python-sqlmodel. [native-inputs]: Add python-pytest, python-setuptools-scm, python-snakemake-interface-software-deployment-plugin-container, spython-snakemake-interface-logger-plugin-envmodules. Relates-to: guix/guix!10625 Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> 
* gnu/packages/python-science.scm (snakemake): Update to 9.25.1.
[source]: Switch to git-fetch.
[arguments]{test-flags}: Refresh them.
{phases}: Add phase 'relax-requirements, drop phase
'call-wrapper-not-wrapped-snakemake, which was not effective for some
time already.
[propagated-inputs]:  Add python-snakemake-interface-logger-plugins,
python-snakemake-interface-scheduler-plugins,
python-snakemake-interface-software-deployment-plugins,
python-sqlmodel.
[native-inputs]: Add python-pytest, python-setuptools-scm,
python-snakemake-interface-software-deployment-plugin-container,
spython-snakemake-interface-logger-plugin-envmodules.

Relates-to: guix/guix!10625
Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add python-snakemake-storage-plugin-http. 2026-09-01T23:23:22+00:00 Nicolas Graves ngraves@ngraves.fr 2026-08-17T19:20:01+00:00 177fcb6b1277abfeda93c70f46596f80f5424e5a * gnu/packages/python-science.scm (python-snakemake-storage-plugin-http): New variable. Relates-to: guix/guix!10625 Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> 
* gnu/packages/python-science.scm (python-snakemake-storage-plugin-http): New variable.

Relates-to: guix/guix!10625
Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add python-snakemake-software-deployment-plugin-envmodules-bootstrap. 2026-09-01T23:23:17+00:00 Nicolas Graves ngraves@ngraves.fr 2026-08-17T19:19:53+00:00 7c4c9e6cb436761c340374d2449c7ea4c550064f * gnu/packages/python-science.scm (python-snakemake-software-deployment-plugin-envmodules-bootstrap): New variable. Relates-to: guix/guix!10625 Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> 
* gnu/packages/python-science.scm (python-snakemake-software-deployment-plugin-envmodules-bootstrap): New variable.

Relates-to: guix/guix!10625
Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>