diff options
| author | Tobias Geerinckx-Rice <me@tobias.gr> | 2016-12-15 11:16:46 +0100 |
|---|---|---|
| committer | Tobias Geerinckx-Rice <me@tobias.gr> | 2016-12-19 20:33:32 +0100 |
| commit | 1f94bff2d4e46a737d5c44ffcc43c7157d7a2178 (patch) | |
| tree | 4b4834aa00d9047d15d86c0820e61f08aeea713d | |
| parent | 361a2fcf8dc0ea6063f7c23d55ccec474e694330 (diff) | |
gnu: cutadapt: Update to 1.12.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12.
[inputs]: Add python-xopen.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 122205f9681..f363936421d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm | |||
| @@ -1804,7 +1804,7 @@ preparation protocols.") | |||
| 1804 | (define-public cutadapt | 1804 | (define-public cutadapt |
| 1805 | (package | 1805 | (package |
| 1806 | (name "cutadapt") | 1806 | (name "cutadapt") |
| 1807 | (version "1.8") | 1807 | (version "1.12") |
| 1808 | (source (origin | 1808 | (source (origin |
| 1809 | (method url-fetch) | 1809 | (method url-fetch) |
| 1810 | (uri (string-append | 1810 | (uri (string-append |
| @@ -1813,7 +1813,7 @@ preparation protocols.") | |||
| 1813 | (file-name (string-append name "-" version ".tar.gz")) | 1813 | (file-name (string-append name "-" version ".tar.gz")) |
| 1814 | (sha256 | 1814 | (sha256 |
| 1815 | (base32 | 1815 | (base32 |
| 1816 | "161bp87y6gd6r5bmvjpn2b1k942i3fizfpa139f0jn6jv1wcp5h5")))) | 1816 | "19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v")))) |
| 1817 | (build-system python-build-system) | 1817 | (build-system python-build-system) |
| 1818 | (arguments | 1818 | (arguments |
| 1819 | ;; tests must be run after install | 1819 | ;; tests must be run after install |
| @@ -1830,6 +1830,8 @@ preparation protocols.") | |||
| 1830 | "/site-packages")) | 1830 | "/site-packages")) |
| 1831 | (zero? (system* "nosetests" "-P" "tests"))) | 1831 | (zero? (system* "nosetests" "-P" "tests"))) |
| 1832 | (alist-delete 'check %standard-phases)))) | 1832 | (alist-delete 'check %standard-phases)))) |
| 1833 | (inputs | ||
| 1834 | `(("python-xopen" ,python-xopen))) | ||
| 1833 | (native-inputs | 1835 | (native-inputs |
| 1834 | `(("python-cython" ,python-cython) | 1836 | `(("python-cython" ,python-cython) |
| 1835 | ("python-nose" ,python-nose))) | 1837 | ("python-nose" ,python-nose))) |
