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authorTobias Geerinckx-Rice <me@tobias.gr>2016-12-15 11:16:46 +0100
committerTobias Geerinckx-Rice <me@tobias.gr>2016-12-19 20:33:32 +0100
commit1f94bff2d4e46a737d5c44ffcc43c7157d7a2178 (patch)
tree4b4834aa00d9047d15d86c0820e61f08aeea713d
parent361a2fcf8dc0ea6063f7c23d55ccec474e694330 (diff)
gnu: cutadapt: Update to 1.12.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12. [inputs]: Add python-xopen.
-rw-r--r--gnu/packages/bioinformatics.scm6
1 files changed, 4 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 122205f9681..f363936421d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1804,7 +1804,7 @@ preparation protocols.")
1804(define-public cutadapt 1804(define-public cutadapt
1805 (package 1805 (package
1806 (name "cutadapt") 1806 (name "cutadapt")
1807 (version "1.8") 1807 (version "1.12")
1808 (source (origin 1808 (source (origin
1809 (method url-fetch) 1809 (method url-fetch)
1810 (uri (string-append 1810 (uri (string-append
@@ -1813,7 +1813,7 @@ preparation protocols.")
1813 (file-name (string-append name "-" version ".tar.gz")) 1813 (file-name (string-append name "-" version ".tar.gz"))
1814 (sha256 1814 (sha256
1815 (base32 1815 (base32
1816 "161bp87y6gd6r5bmvjpn2b1k942i3fizfpa139f0jn6jv1wcp5h5")))) 1816 "19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v"))))
1817 (build-system python-build-system) 1817 (build-system python-build-system)
1818 (arguments 1818 (arguments
1819 ;; tests must be run after install 1819 ;; tests must be run after install
@@ -1830,6 +1830,8 @@ preparation protocols.")
1830 "/site-packages")) 1830 "/site-packages"))
1831 (zero? (system* "nosetests" "-P" "tests"))) 1831 (zero? (system* "nosetests" "-P" "tests")))
1832 (alist-delete 'check %standard-phases)))) 1832 (alist-delete 'check %standard-phases))))
1833 (inputs
1834 `(("python-xopen" ,python-xopen)))
1833 (native-inputs 1835 (native-inputs
1834 `(("python-cython" ,python-cython) 1836 `(("python-cython" ,python-cython)
1835 ("python-nose" ,python-nose))) 1837 ("python-nose" ,python-nose)))