diff options
| author | Ludovic Courtès <ludo@gnu.org> | 2026-03-11 23:12:16 +0100 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2026-03-20 13:27:16 +0100 |
| commit | 1ae20f03f43a2af2bcde3751a2809fe152298d34 (patch) | |
| tree | be11f116044ab4cbc7994e2cf88ded0e21db4bbc /gnu/packages/bioinformatics.scm | |
| parent | 4ba653e637940b147ea5cdcf45397b8ac7f3d014 (diff) | |
gnu: Reference the inherited inputs values.
This commit was made by running this command:
sed -e's/modify-inputs (package-\([a-z-]*\)inputs [a-zA-Z0-9-]\+)/modify-inputs \1inputs/g' -i gnu/packages/*.scm
… and then reverting individual hunks where the change would trigger unbound
variable warnings or other issues (such as ‘native-inputs’ is bound in the
body of the ‘inputs’ field, but it refers to the ‘native-inputs’ thunk defined
just above).
Change-Id: I6d94819f2809313fa1fbefc61897502ee7d66fab
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a0b2f6db624..5b2d5194ff3 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm | |||
| @@ -2129,7 +2129,7 @@ Format (GFF) with Biopython integration.") | |||
| 2129 | (sha256 | 2129 | (sha256 |
| 2130 | (base32 "131hiir94jkm9jj2wfpybwndgzn8k0zc1ji1qjn5cz7w48x3ri13")))) | 2130 | (base32 "131hiir94jkm9jj2wfpybwndgzn8k0zc1ji1qjn5cz7w48x3ri13")))) |
| 2131 | (propagated-inputs | 2131 | (propagated-inputs |
| 2132 | (modify-inputs (package-propagated-inputs python-bcbio-gff) | 2132 | (modify-inputs propagated-inputs |
| 2133 | (replace "python-biopython" python-biopython-1.73)))))) | 2133 | (replace "python-biopython" python-biopython-1.73)))))) |
| 2134 | 2134 | ||
| 2135 | (define bed-sample-files | 2135 | (define bed-sample-files |
| @@ -6703,7 +6703,7 @@ meso, or continuum scale.") | |||
| 6703 | "-D MLIAP_ENABLE_PYTHON=yes" | 6703 | "-D MLIAP_ENABLE_PYTHON=yes" |
| 6704 | (string-append "-DN2P2_DIR=" #$(this-package-input "n2p2")))))) | 6704 | (string-append "-DN2P2_DIR=" #$(this-package-input "n2p2")))))) |
| 6705 | (inputs | 6705 | (inputs |
| 6706 | (modify-inputs (package-inputs lammps) | 6706 | (modify-inputs inputs |
| 6707 | (delete "pnetcdf") | 6707 | (delete "pnetcdf") |
| 6708 | (replace "hdf5-parallel-openmpi" hdf5) | 6708 | (replace "hdf5-parallel-openmpi" hdf5) |
| 6709 | (delete "openmpi"))))) | 6709 | (delete "openmpi"))))) |
