diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2026-03-04 13:25:30 +0100 |
|---|---|---|
| committer | Andreas Enge <andreas@enge.fr> | 2026-03-07 11:57:38 +0100 |
| commit | e994eb8b648464dbcb409c20c7fd8e0b7972b689 (patch) | |
| tree | ab83d2227536c5b6d7951cc4117aaaa1449ffee4 /gnu/packages/bioinformatics.scm | |
| parent | f3a42d40e0016b3d349e8af4f88b032ea6ae2e9e (diff) | |
gnu: r-singlet: Update to 0.99.8-1.ef4a374.
Yes, this is an update, even though the patch level used to be .26 and now
is .8. That's post-semantic versioning.
* gnu/packages/bioinformatics.scm (r-singlet): Update to 0.99.8-1.ef4a374.
[propagated-inputs]: Add r-statmod.
Change-Id: I95d1d60966c68cb8f66d79b6af6cab82bcf16a62
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 6 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index fab67e01a4d..68d46178850 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm | |||
| @@ -1694,11 +1694,11 @@ the mutation counts.") | |||
| 1694 | (license license:gpl3))) | 1694 | (license license:gpl3))) |
| 1695 | 1695 | ||
| 1696 | (define-public r-singlet | 1696 | (define-public r-singlet |
| 1697 | (let ((commit "765a6c45081807a1522f0e8983e2417822a36f36") | 1697 | (let ((commit "ef4a374f27681477b95d856b74bd3cbbb379308d") |
| 1698 | (revision "1")) | 1698 | (revision "1")) |
| 1699 | (package | 1699 | (package |
| 1700 | (name "r-singlet") | 1700 | (name "r-singlet") |
| 1701 | (version (git-version "0.99.26" revision commit)) | 1701 | (version (git-version "0.99.8" revision commit)) |
| 1702 | (source (origin | 1702 | (source (origin |
| 1703 | (method git-fetch) | 1703 | (method git-fetch) |
| 1704 | (uri (git-reference | 1704 | (uri (git-reference |
| @@ -1707,7 +1707,7 @@ the mutation counts.") | |||
| 1707 | (file-name (git-file-name name version)) | 1707 | (file-name (git-file-name name version)) |
| 1708 | (sha256 | 1708 | (sha256 |
| 1709 | (base32 | 1709 | (base32 |
| 1710 | "040v8wzl9qr8ribr6qss61fz4698d14cqs8nxbc8hqwiqlpy3vs4")))) | 1710 | "1s9g3i0ypsnpnal40f223d5lzijxchwaf1kvavyijl75zaj8i6af")))) |
| 1711 | (properties `((upstream-name . "singlet"))) | 1711 | (properties `((upstream-name . "singlet"))) |
| 1712 | (build-system r-build-system) | 1712 | (build-system r-build-system) |
| 1713 | (propagated-inputs (list r-dplyr | 1713 | (propagated-inputs (list r-dplyr |
| @@ -1718,10 +1718,12 @@ the mutation counts.") | |||
| 1718 | r-matrix | 1718 | r-matrix |
| 1719 | r-msigdbr | 1719 | r-msigdbr |
| 1720 | r-rcpp | 1720 | r-rcpp |
| 1721 | ;; See https://github.com/zdebruine/singlet/issues/25 | ||
| 1721 | r-rcppml/devel | 1722 | r-rcppml/devel |
| 1722 | r-reshape2 | 1723 | r-reshape2 |
| 1723 | r-scuttle | 1724 | r-scuttle |
| 1724 | r-seurat)) | 1725 | r-seurat |
| 1726 | r-statmod)) | ||
| 1725 | (native-inputs (list r-knitr r-testthat)) | 1727 | (native-inputs (list r-knitr r-testthat)) |
| 1726 | (home-page "https://github.com/zdebruine/singlet") | 1728 | (home-page "https://github.com/zdebruine/singlet") |
| 1727 | (synopsis "Non-negative Matrix Factorization for single-cell analysis") | 1729 | (synopsis "Non-negative Matrix Factorization for single-cell analysis") |
