diff options
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 12 |
1 files changed, 2 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e8408b95a46..0619ea66b06 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm | |||
| @@ -12968,7 +12968,7 @@ in an easily configurable manner.") | |||
| 12968 | (define-public pigx-bsseq | 12968 | (define-public pigx-bsseq |
| 12969 | (package | 12969 | (package |
| 12970 | (name "pigx-bsseq") | 12970 | (name "pigx-bsseq") |
| 12971 | (version "0.0.9") | 12971 | (version "0.0.10") |
| 12972 | (source (origin | 12972 | (source (origin |
| 12973 | (method url-fetch) | 12973 | (method url-fetch) |
| 12974 | (uri (string-append "https://github.com/BIMSBbioinfo/pigx_bsseq/" | 12974 | (uri (string-append "https://github.com/BIMSBbioinfo/pigx_bsseq/" |
| @@ -12976,7 +12976,7 @@ in an easily configurable manner.") | |||
| 12976 | "/pigx_bsseq-" version ".tar.gz")) | 12976 | "/pigx_bsseq-" version ".tar.gz")) |
| 12977 | (sha256 | 12977 | (sha256 |
| 12978 | (base32 | 12978 | (base32 |
| 12979 | "0j1dfjk8m1p1h6d5yw63scjlbx56z8gixmbw626w1vcyblg0frmz")))) | 12979 | "0l97wvkq4diq8lcarraj33bby1zzf0w804jwi8mlc5qddp8idwhy")))) |
| 12980 | (build-system gnu-build-system) | 12980 | (build-system gnu-build-system) |
| 12981 | (arguments | 12981 | (arguments |
| 12982 | `(#:phases | 12982 | `(#:phases |
| @@ -12988,14 +12988,6 @@ in an easily configurable manner.") | |||
| 12988 | (setenv "TZDIR" | 12988 | (setenv "TZDIR" |
| 12989 | (string-append (assoc-ref inputs "tzdata") | 12989 | (string-append (assoc-ref inputs "tzdata") |
| 12990 | "/share/zoneinfo")) | 12990 | "/share/zoneinfo")) |
| 12991 | #t)) | ||
| 12992 | (add-after 'install 'wrap-executable | ||
| 12993 | ;; Make sure the executable finds all R modules. | ||
| 12994 | (lambda* (#:key inputs outputs #:allow-other-keys) | ||
| 12995 | (let ((out (assoc-ref outputs "out"))) | ||
| 12996 | (wrap-program (string-append out "/bin/pigx-bsseq") | ||
| 12997 | `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE"))) | ||
| 12998 | `("PYTHONPATH" ":" = (,(getenv "PYTHONPATH"))))) | ||
| 12999 | #t))))) | 12991 | #t))))) |
| 13000 | (native-inputs | 12992 | (native-inputs |
| 13001 | `(("tzdata" ,tzdata))) | 12993 | `(("tzdata" ,tzdata))) |
