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path: root/gnu/packages/bioinformatics.scm
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2026-02-20gnu: r-anndatar: Update to 1.0.1.Ricardo Wurmus1-37/+0
2026-02-20gnu: r-voltron: Update to 0.2.3.Ricardo Wurmus1-125/+123
2026-02-20gnu: r-imagearray: Update to 0.99.6-1.2f90694.Ricardo Wurmus1-7/+17
2026-02-20gnu: r-hdf5dataframe: Update to 0.99.3-1.61c52cb.Ricardo Wurmus1-9/+13
2026-02-19gnu: blast+: Add 'sqlite' dependency.Simon Tournier1-1/+2
2026-02-18gnu: bandage: Support Wayland.Danny Milosavljevic1-1/+1
2026-02-17gnu: Remove tophat.Andreas Enge1-76/+0
2026-02-15gnu: Remove pin on go-1.23 by setting -vet=off in tests.Ethan Blanton1-2/+2
2026-02-14gnu: r-saige: Update to 1.5.1-1.7172b7f.Ricardo Wurmus1-4/+4
2026-02-11gnu: Add alignoth.Alexis Simon1-1/+25
2026-02-10gnu: Remove PKG_CONFIG_EXECUTABLE configure-flags.Dariqq1-5/+1
2026-02-09gnu: rcas-web: Update to 0.2.0.Ricardo Wurmus1-47/+46
2026-02-07gnu: Remove python-biofluff.Andreas Enge1-48/+0
2026-02-07gnu: scvelo: Relocate phase 'set-numba-cache-dir.Sharlatan Hellseher1-1/+1
2026-02-07gnu: python-ikarus: Update to 0.0.3.Sharlatan Hellseher1-20/+19
2026-02-07gnu: python-celltypist: Update to 1.7.1.Sharlatan Hellseher1-15/+17
2026-02-07gnu: python-scanpy: Skip one more test.Sharlatan Hellseher1-2/+4
2026-02-07gnu: python-splicekit: Refresh package style.Sharlatan Hellseher1-23/+23
2026-02-07gnu: python-pybio: Relocate phase 'set-home.Sharlatan Hellseher1-1/+1
2026-02-07gnu: pairadise: Disable missing tests.Sharlatan Hellseher1-1/+2
2026-02-07gnu: python-tornado: Update to 6.4.2.Sharlatan Hellseher1-1/+1
2026-02-07gnu: Drop setting SETUPTOOLS_SCM_PRETEND_VERSION in some packages.Nicolas Graves1-38/+1
2026-02-07gnu: Remove python-importlib-metadata input from some packages.Nicolas Graves1-4/+0
2026-02-07gnu: Remove python-flake8 native-input from some packages.Nicolas Graves1-2/+1
2026-02-07gnu: python-doubletdetection: Remove python-black native-input.Nicolas Graves1-2/+1
2026-02-07gnu: python-pybedtools: Update to 0.12.0.Sharlatan Hellseher1-41/+42
2026-02-07build-system/pyproject: Remove uneeded use of pyproject-guile-json.Nicolas Graves1-4/+2
2026-02-05gnu: Remove python-multivelo.Simon Tournier1-46/+0
2026-02-04gnu: scvelo: Deprecate in favor of python-scvelo.Nguyễn Gia Phong1-5/+8
2026-02-02gnu: salmon: Update dependency on tbb.Cayetano Santos1-2/+3
2026-01-28gnu: bowtie: Update to 2.5.4.Cayetano Santos1-30/+42
2026-01-25gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.Ricardo Wurmus1-5/+10
2026-01-25gnu: r-pizzarr: Update to 0.1.0-2.5f47057.Ricardo Wurmus1-3/+3
2026-01-25gnu: r-zarrdataframe: Update to 0.0.0-2.84c7db2.Ricardo Wurmus1-7/+9
2026-01-25gnu: r-signac: Update to 1.16.0-1.f5a8411.Ricardo Wurmus1-4/+8
2026-01-25gnu: python-pyspoa: Switch to pyproject.Nicolas Graves1-25/+19
2026-01-25gnu: python-pypairix: Fix package.Nicolas Graves1-0/+5
2026-01-25gnu: flair: Switch to pyproject.Nicolas Graves1-16/+2
2026-01-25gnu: python-liana-py: Don't propagate python-numpydoc.Sören Tempel1-1/+1
2026-01-25gnu: python-scanrbp: Include data in package.Hugo Buddelmeijer1-7/+50
2026-01-25gnu: python-biothings-client: Update to 0.4.1.Nicolas Graves1-7/+11
2026-01-25gnu: python-drep: Skip additional test.Nicolas Graves1-0/+1
2026-01-25gnu: scregseg: Skip 'sanity-check phase.Nicolas Graves1-1/+5
2026-01-25gnu: python-coolbox: Fix inputs.Nicolas Graves1-1/+1
2026-01-25gnu: python-genomepy: Update to 0.16.3.Sharlatan Hellseher1-8/+11
2026-01-25gnu: python-pygam: Update to 0.12.0.Sharlatan Hellseher1-22/+17
2026-01-25gnu: python-phenograph: Fix tests.Sharlatan Hellseher1-8/+14
2026-01-25gnu: Remove fanc.Sharlatan Hellseher1-3/+0
2026-01-25gnu: python-peaks2utr: Use python-numpy@1.Sharlatan Hellseher1-1/+1
2026-01-25gnu: python-liana-py: Update to 1.6.1.Sharlatan Hellseher1-3/+9
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