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authorGhislain Vaillant <ghislain.vaillant@inria.fr>2026-08-28 18:21:06 +0200
committerGhislain Vaillant <ghislain.vaillant@inria.fr>2026-08-29 11:05:28 +0200
commit55cc1fc4c8b0a6de12a90d303bf963ffe159385f (patch)
treec317be27c07df268a78ee08bdb3505d25346e345
parentfa619dde7d577ddd1d3e05ce73b1b42f2d891e0b (diff)
python-xyz: Remove python-hdmf-zarr.
Rationales: hdmf-zarr is not compatible with zarr 3. * guix-science/packages/python-xyz.scm (python-hdmf-zarr): Remove variable.
-rw-r--r--guix-science/packages/python-xyz.scm41
1 files changed, 0 insertions, 41 deletions
diff --git a/guix-science/packages/python-xyz.scm b/guix-science/packages/python-xyz.scm
index 16e0064..00eac42 100644
--- a/guix-science/packages/python-xyz.scm
+++ b/guix-science/packages/python-xyz.scm
@@ -850,47 +850,6 @@ directly.")
850science data standards.") 850science data standards.")
851 (license license:bsd-3))) 851 (license license:bsd-3)))
852 852
853(define-public python-hdmf-zarr
854 (package
855 (name "python-hdmf-zarr")
856 (version "0.12.0")
857 (source
858 (origin
859 (method git-fetch)
860 (uri (git-reference
861 (url "https://github.com/hdmf-dev/hdmf-zarr")
862 (commit version)))
863 (file-name (git-file-name name version))
864 (sha256
865 (base32 "11bpljbf9l8sbbyggz2h1kdaif9jxfbsf6xyavhzickdjk1368lx"))))
866 (build-system pyproject-build-system)
867 (arguments
868 (list
869 #:test-flags
870 #~(list
871 ;; Requires python-scipy.
872 "-k" "not CSRMatrix")
873 #:phases
874 #~(modify-phases %standard-phases
875 (add-before 'build 'set-home
876 (lambda _
877 (setenv "HOME"
878 (getcwd)))))))
879 (propagated-inputs (list python-hdmf
880 python-numcodecs
881 python-numpy
882 python-pynwb
883 python-threadpoolctl
884 python-zarr))
885 (native-inputs (list python-dateutil python-hatch-vcs python-hatchling
886 python-pytest))
887 (home-page "https://hdmf-zarr.readthedocs.io/")
888 (synopsis "Zarr I/O backend for HDMF")
889 (description
890 "This package provides a Zarr I/O backend for the @acronym{HDMF,
891Hierarchical Data Modeling Framework}.")
892 (license license:bsd-3)))
893
894(define-public python-hydra-core 853(define-public python-hydra-core
895 (package 854 (package
896 (name "python-hydra-core") 855 (name "python-hydra-core")