1 files changed, 38 insertions, 15 deletions

diff --git a/guix-science/packages/physics.scm b/guix-science/packages/physics.scm
index f6c6b5e..6e846b1 100644
--- a/guix-science/packages/physics.scm
+++ b/guix-science/packages/physics.scm
@@ -1042,7 +1042,7 @@ makes them usable from @code{h5py}.")
 (define-public python-pyfai
   (package
     (name "python-pyfai")
-    (version "2025.12.1")
+    (version "2026.05")
     (source
      (origin
        (method git-fetch)
@@ -1051,41 +1051,64 @@ makes them usable from @code{h5py}.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1gzlgw3ka0wbvnz8x7jgf9yd6606m2ib1q082dy8yycb65lgh13z"))))
+        (base32 "05900wz1sdhy9inj3a1jz7fqiigwcwdblaf0fg8z8yzkj3r0sicm"))))
     (build-system pyproject-build-system)
     (arguments
      (list
       #:phases
       #~(modify-phases %standard-phases
+          ;; Requires install first.
           (delete 'check)
-          (add-after 'install 'check
-            (lambda* (#:key tests? inputs outputs #:allow-other-keys)
+
+          (add-after 'add-install-to-pythonpath 'check
+            (lambda* (#:key tests? #:allow-other-keys)
               (when tests?
-                (add-installed-pythonpath inputs outputs)
-                (invoke "python3" "run_tests.py" "--installed")))))))
+                (invoke "python3"
+                        "-m"
+                        "pytest"
+                        "--pyargs"
+                        "pyFAI.test"
+                        (string-join (list "--deselect=test_pickle.py"
+                                           "TestPickle" "test_Calibrant") "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp" "testCheckCalib")
+                                     "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp" "testMxcalibrate")
+                                     "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp" "testPilx") "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp"
+                                           "testPyfaiBenchmark") "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp" "testPyfaiCalib")
+                                     "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp"
+                                           "testPyfaiDrawmask") "::")
+                        (string-join (list "--deselect=test_scripts.py"
+                                           "TestScriptsHelp"
+                                           "testPyfaiRecalib") "::"))))))))
     (propagated-inputs (list python-fabio
                              python-h5py
-                             python-hdf5plugin
                              python-matplotlib
                              python-numexpr
                              python-numpy
-                             python-pyopencl
-                             python-pyside-6
                              python-scipy
                              python-silx))
     (native-inputs (list python-meson ninja python-cython
-                         python-pyproject-metadata))
+                         python-pyproject-metadata python-pytest))
     (home-page "http://www.silx.org/doc/pyfai/latest")
     (synopsis "Python implementation of fast azimuthal integration")
     (description
      "PyFAI is an azimuthal integration library that tries to be fast (as fast
 as C and even more using OpenCL and GPU).  It is based on histogramming of the
 2theta/Q positions of each (center of) pixel weighted by the intensity of each
-pixel, but parallel version uses a SparseMatrix-DenseVector
-multiplication.  Neighboring output bins get also a contribution of pixels next
-to the border thanks to pixel splitting. Finally pyFAI provides also tools to
-calibrate the experimental setup using Debye-Scherrer rings of a reference
-compound.")
+pixel, but parallel version uses a SparseMatrix-DenseVector multiplication.
+Neighboring output bins get also a contribution of pixels next to the border
+thanks to pixel splitting.  Finally pyFAI provides also tools to calibrate the
+experimental setup using Debye-Scherrer rings of a reference compound.")
     (license license:expat)))
 
 (define-public python-occ-core