diff options
| author | Roel Janssen <roel@gnu.org> | 2016-03-16 10:27:48 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-03-16 11:23:27 +0100 |
| commit | 247d498aaa7938efe9acbd83ea8721e477a7236d (patch) | |
| tree | 4b367c436979930bb5b1e14a84cdd138351f65e1 | |
| parent | 6a35566df7e2f9876242d10a14074ae662a0037f (diff) | |
gnu: Add r-dnacopy.
* gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 190a058cc65..bdd44128fbc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm | |||
| @@ -3887,6 +3887,28 @@ barplots or heatmaps.") | |||
| 3887 | packages.") | 3887 | packages.") |
| 3888 | (license license:artistic2.0))) | 3888 | (license license:artistic2.0))) |
| 3889 | 3889 | ||
| 3890 | (define-public r-dnacopy | ||
| 3891 | (package | ||
| 3892 | (name "r-dnacopy") | ||
| 3893 | (version "1.44.0") | ||
| 3894 | (source (origin | ||
| 3895 | (method url-fetch) | ||
| 3896 | (uri (bioconductor-uri "DNAcopy" version)) | ||
| 3897 | (sha256 | ||
| 3898 | (base32 | ||
| 3899 | "1c1px4rbr36xx929hp59k7ca9k5ab66qmn8k63fk13278ncm6h66")))) | ||
| 3900 | (properties | ||
| 3901 | `((upstream-name . "DNAcopy"))) | ||
| 3902 | (build-system r-build-system) | ||
| 3903 | (inputs | ||
| 3904 | `(("gfortran" ,gfortran))) | ||
| 3905 | (home-page "bioconductor.org/packages/DNAcopy") | ||
| 3906 | (synopsis "Implementation of a circular binary segmentation algorithm") | ||
| 3907 | (description "This package implements the circular binary segmentation (CBS) | ||
| 3908 | algorithm to segment DNA copy number data and identify genomic regions with | ||
| 3909 | abnormal copy number.") | ||
| 3910 | (license license:gpl2+))) | ||
| 3911 | |||
| 3890 | (define-public r-s4vectors | 3912 | (define-public r-s4vectors |
| 3891 | (package | 3913 | (package |
| 3892 | (name "r-s4vectors") | 3914 | (name "r-s4vectors") |
