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authorRoel Janssen <roel@gnu.org>2016-03-16 10:27:48 +0100
committerRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-03-16 11:23:27 +0100
commit247d498aaa7938efe9acbd83ea8721e477a7236d (patch)
tree4b367c436979930bb5b1e14a84cdd138351f65e1
parent6a35566df7e2f9876242d10a14074ae662a0037f (diff)
gnu: Add r-dnacopy.
* gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
-rw-r--r--gnu/packages/bioinformatics.scm22
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 190a058cc65..bdd44128fbc 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3887,6 +3887,28 @@ barplots or heatmaps.")
3887packages.") 3887packages.")
3888 (license license:artistic2.0))) 3888 (license license:artistic2.0)))
3889 3889
3890(define-public r-dnacopy
3891 (package
3892 (name "r-dnacopy")
3893 (version "1.44.0")
3894 (source (origin
3895 (method url-fetch)
3896 (uri (bioconductor-uri "DNAcopy" version))
3897 (sha256
3898 (base32
3899 "1c1px4rbr36xx929hp59k7ca9k5ab66qmn8k63fk13278ncm6h66"))))
3900 (properties
3901 `((upstream-name . "DNAcopy")))
3902 (build-system r-build-system)
3903 (inputs
3904 `(("gfortran" ,gfortran)))
3905 (home-page "bioconductor.org/packages/DNAcopy")
3906 (synopsis "Implementation of a circular binary segmentation algorithm")
3907 (description "This package implements the circular binary segmentation (CBS)
3908algorithm to segment DNA copy number data and identify genomic regions with
3909abnormal copy number.")
3910 (license license:gpl2+)))
3911
3890(define-public r-s4vectors 3912(define-public r-s4vectors
3891 (package 3913 (package
3892 (name "r-s4vectors") 3914 (name "r-s4vectors")