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authorLars-Dominik Braun <ldb@leibniz-psychology.org>2023-04-17 11:40:28 +0200
committerLars-Dominik Braun <ldb@leibniz-psychology.org>2023-04-17 11:55:30 +0200
commit89acc4d5c645cf8bdb8f35c490b50f168931bd12 (patch)
treeda6a7b8ffc19f469768defa9cbacd9b68cb502b3 /gnu
parenta117510a8c9246f8e09577780ccaf3955f98d7ad (diff)
gnu: r-mixedpower: Update to b2b87068.
* gnu/packages/statistics.scm (r-mixedpower): Update to commit b2b87068546327d8f592d141e5482e0478c1b2ee, remove patch. * gnu/packages/patches/r-mixedpower-r2power.patch: Remove file. * gnu/local.mk: Unregister it.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/local.mk1
-rw-r--r--gnu/packages/patches/r-mixedpower-r2power.patch26
-rw-r--r--gnu/packages/statistics.scm11
3 files changed, 5 insertions, 33 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 0849d322762..1241ab09c05 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1817,7 +1817,6 @@ dist_patch_DATA = \
1817 %D%/packages/patches/racket-zuo-bin-sh.patch \ 1817 %D%/packages/patches/racket-zuo-bin-sh.patch \
1818 %D%/packages/patches/remake-impure-dirs.patch \ 1818 %D%/packages/patches/remake-impure-dirs.patch \
1819 %D%/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch \ 1819 %D%/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch \
1820 %D%/packages/patches/r-mixedpower-r2power.patch \
1821 %D%/packages/patches/rng-tools-revert-build-randstat.patch \ 1820 %D%/packages/patches/rng-tools-revert-build-randstat.patch \
1822 %D%/packages/patches/rocm-comgr-3.1.0-dependencies.patch \ 1821 %D%/packages/patches/rocm-comgr-3.1.0-dependencies.patch \
1823 %D%/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch \ 1822 %D%/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch \
diff --git a/gnu/packages/patches/r-mixedpower-r2power.patch b/gnu/packages/patches/r-mixedpower-r2power.patch
deleted file mode 100644
index a3307ca7b56..00000000000
--- a/gnu/packages/patches/r-mixedpower-r2power.patch
+++ /dev/null
@@ -1,26 +0,0 @@
1From e882fda905150649aa887c72731144330ca297b5 Mon Sep 17 00:00:00 2001
2From: Lars-Dominik Braun <lars@6xq.net>
3Date: Fri, 28 Oct 2022 09:18:11 +0200
4Subject: [PATCH] Fix R2power with R>=4.2
5
6The previous commit missed this if statement.
7---
8 R/meta_functions.R | 2 +-
9 1 file changed, 1 insertion(+), 1 deletion(-)
10
11diff --git a/R/meta_functions.R b/R/meta_functions.R
12index a65f0c1..fb3feba 100644
13--- a/R/meta_functions.R
14+++ b/R/meta_functions.R
15@@ -172,7 +172,7 @@ R2power <- function(model, data, fixed_effects, simvar,
16 } # end if databased
17
18 # 2. SESOI
19- suppressWarnings(if (SESOI != F){ # supress warning generated by if statement if SESOI =! F
20+ suppressWarnings(if (!is.logical(SESOI)){
21
22 # change beta coeficients to SESOI values
23 model@beta <- SESOI
24--
252.37.4
26
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 138088b4b3b..dcb04859921 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -7276,9 +7276,10 @@ models, using simulation. It was designed to work with models fit using the
7276 (license license:gpl2+))) 7276 (license license:gpl2+)))
7277 7277
7278(define-public r-mixedpower 7278(define-public r-mixedpower
7279 ;; This commit contains fixes for R>=4.2. A newer release does not exist. 7279 ;; This commit contains fixes for R>=4.2 and contains new features. A
7280 (let ((commit "6520195481bca3ce01862ef80a28c53b0a35d0f5") 7280 ;; newer release does not exist.
7281 (revision "1")) 7281 (let ((commit "b2b87068546327d8f592d141e5482e0478c1b2ee")
7282 (revision "2"))
7282 (package 7283 (package
7283 (name "r-mixedpower") 7284 (name "r-mixedpower")
7284 (version (git-version "2.0" revision commit)) 7285 (version (git-version "2.0" revision commit))
@@ -7291,9 +7292,7 @@ models, using simulation. It was designed to work with models fit using the
7291 (commit commit))) 7292 (commit commit)))
7292 (file-name (git-file-name name version)) 7293 (file-name (git-file-name name version))
7293 (sha256 7294 (sha256
7294 (base32 "114z9pvya2jg10y804ga41gq00r7zcw4a7c7234ybhmv3jqw78q1")) 7295 (base32 "0pys66a6c1k2fp5qk9grhzg1q1d3q51rggcilmdssimkmcsm234z"))))
7295 (patches
7296 (search-patches "r-mixedpower-r2power.patch"))))
7297 (properties `((upstream-name . "mixedpower"))) 7296 (properties `((upstream-name . "mixedpower")))
7298 (build-system r-build-system) 7297 (build-system r-build-system)
7299 (propagated-inputs 7298 (propagated-inputs