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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-30 13:20:05 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-12-11 06:27:42 +0100
commit9535cee6cdf259f898fae043564038f53a809a9e (patch)
tree9520748dadc28100bf56e63a15bc4547ce845f35 /gnu
parent65334547674bdaeb75eb37ffbe23ba6f9fd486b1 (diff)
gnu: Add r-polyester.
* gnu/packages/bioconductor.scm (r-polyester): New variable. Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7ff364ee550..4f152134811 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9592,6 +9592,34 @@ package contains functions for combining the results of multiple runs of gene
9592set analyses.") 9592set analyses.")
9593 (license license:gpl2+))) 9593 (license license:gpl2+)))
9594 9594
9595(define-public r-polyester
9596 (package
9597 (name "r-polyester")
9598 (version "1.38.0")
9599 (source
9600 (origin
9601 (method url-fetch)
9602 (uri (bioconductor-uri "polyester" version))
9603 (sha256
9604 (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4"))))
9605 (properties `((upstream-name . "polyester")))
9606 (build-system r-build-system)
9607 (propagated-inputs
9608 (list r-biostrings
9609 r-iranges
9610 r-limma
9611 r-logspline
9612 r-s4vectors
9613 r-zlibbioc))
9614 (native-inputs (list r-knitr))
9615 (home-page "https://bioconductor.org/packages/polyester")
9616 (synopsis "Simulate RNA-seq reads")
9617 (description
9618 "The polyester package simulates RNA-seq reads from differential expression
9619experiments with replicates. The reads can then be aligned and used to perform
9620comparisons of methods for differential expression.")
9621 (license license:artistic2.0)))
9622
9595(define-public r-powertcr 9623(define-public r-powertcr
9596 (package 9624 (package
9597 (name "r-powertcr") 9625 (name "r-powertcr")