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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)AuthorFilesLines
6 daysgnu: bio-vcf: Remove a problematic test file.gemmaro1-0/+10
8 daysgnu: Remove bowtie1.Andreas Enge1-45/+0
10 daysgnu: java-htsjdk-latest: Improve style.Nicolas Graves1-16/+19
10 daysgnu: java-htsjdk-2.10.1: Improve style.Nicolas Graves1-10/+11
12 daysgnu: sambamba: Remove compiler from runtime closure.Jonas Meeuws1-1/+4
12 daysgnu: sambamba: Use G-Expressions.Jonas Meeuws1-22/+23
12 daysgnu: sambamba: Reformat.Jonas Meeuws1-17/+15
12 daysgnu: sambamba: Update to 1.0.1-0.dba65af.Jonas Meeuws1-45/+50
2026-08-16gnu: python-scikit-bio: Remove patch.Nicolas Graves1-10/+1
2026-08-10gnu: dropseq-tools: Improve style.Nicolas Graves1-110/+110
2026-08-10gnu: bismark: Improve style.Nicolas Graves1-19/+15
2026-08-10gnu: piranha: Improve style.Nicolas Graves1-46/+46
2026-08-10gnu: java-htsjdk: Improve style.Nicolas Graves1-15/+16
2026-08-10gnu: Remove pigx-sars-cov2-ww.Andreas Enge1-3/+0
2026-08-10gnu: Remove python-pyega3.Andreas Enge1-3/+0
2026-08-10gnu: Remove python-decoupler-py.Andreas Enge1-4/+0
2026-08-09gnu: hdf5-parallel-openmpi: Propagate openmpi.Sharlatan Hellseher1-3/+1
2026-08-08gnu: python-liana-py: Update to 1.8.1.Sharlatan Hellseher1-82/+55
2026-08-08gnu: python-ete3: Fix build.Sharlatan Hellseher1-2/+3
2026-08-08gnu: python-ega-download-client: Disable tests.Sharlatan Hellseher1-0/+5
2026-08-08gnu: python-scikit-bio: Update to 0.7.3.Nicolas Graves1-9/+27
2026-08-08gnu: python-muon: Update to 0.1.7-0.05d3bf1.Sharlatan Hellseher1-37/+48
2026-08-08gnu: python-cooltools: Fix build by using python-pandas@2.Sharlatan Hellseher1-2/+5
2026-08-08gnu: python-drep: Update to 3.7.1.Nicolas Graves1-8/+3
2026-08-08gnu: stpipeline: Update to 2.1.0.Nicolas Graves1-6/+8
2026-08-08gnu: python-pegasusio: Update to 0.11.0.Nicolas Graves1-11/+12
2026-08-08gnu: python-decoupler: Update to 2.2.0.Sharlatan Hellseher1-15/+14
2026-08-08gnu: python-circe: Update to 0.4.0.Sharlatan Hellseher1-5/+11
2026-08-08gnu: python-scanpy: Update to 1.12.2.Sharlatan Hellseher1-65/+150
2026-08-08gnu: python-scprep: Skip more tests.Sharlatan Hellseher1-2/+15
2026-08-08gnu: python-mudata: Update to 0.3.10.Sharlatan Hellseher1-13/+26
2026-08-08gnu: python-mofapy2: Update to 0.7.4-0.45d7e90.Sharlatan Hellseher1-3/+8
2026-08-08gnu: python-biom-format: Update to 2.1.17-0.0f3855c.Sharlatan Hellseher1-7/+12
2026-08-08gnu: python-biopython: Update to 1.87.Sharlatan Hellseher1-3/+3
2026-08-06gnu: indelfixer: Improve style.Nicolas Graves1-2/+1
2026-08-06gnu: r-phantompeakqualtools: Improve style.Nicolas Graves1-11/+11
2026-08-06gnu: hisat2: Improve style.Nicolas Graves1-27/+28
2026-08-06gnu: express-beta-diversity: Improve style.Nicolas Graves1-13/+16
2026-08-06gnu: libbigwig: Improve style.Nicolas Graves1-2/+2
2026-08-05gnu: Remove filtlong.Andreas Enge1-57/+0
2026-08-05gnu: Remove r-pando.Andreas Enge1-58/+0
2026-08-01gnu: Remove python-episcanpy.Sharlatan Hellseher1-58/+0
2026-07-07gnu: python-bioframe: Update to 0.8.0.Sharlatan Hellseher1-12/+18
2026-07-03gnu: llvm: Switch default llvm to 22.Zheng Junjie1-2/+2
2026-07-01gnu: hisat2: Update to 2.2.2.Spencer King1-2/+7
2026-06-26gnu: python-pybigwig: Update to 0.3.25.Andreas Enge1-11/+14
2026-06-26gnu: libbigwig: Update to 0.4.8.Andreas Enge1-2/+2
2026-06-24gnu: Remove phylip.Andreas Enge1-36/+0
2026-06-19gnu: macs-3: Rename variable to macs.Andreas Enge1-3/+6
2026-06-19gnu: Remove macs.Andreas Enge1-50/+0
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